WebJun 24, 2024 · According to KEGG enrichment analysis, there were 1,303 DEGs mapped to 110 KEGG pathways in total (Supplementary Table 6). Figure 1C shows the top 20 … WebMar 1, 2024 · Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analysis for upregulated and downregulated transcripts was carried out using ThaleMine …
SemanticGO: a tool for gene functional similarity analysis in
WebJun 24, 2024 · According to KEGG enrichment analysis, there were 1,303 DEGs mapped to 110 KEGG pathways in total (Supplementary Table 6). Figure 1C shows the top 20 enriched pathways assigned to our DEGs. Most of the DEGs participated in “Metabolic pathways” (258 DEGs, ath01100) and “Biosynthesis of secondary metabolites” (122 DEGs, ath01110 ... WebKEGG Orthology (KO) [BR:ath00001] 09100 Metabolism 09109 Metabolism of terpenoids and polyketides 00900 Terpenoid backbone biosynthesis AT2G18620 09180 Brite Hierarchies 09181 Protein families: metabolism 01006 Prenyltransferases [BR:ath01006] AT2G18620 Enzymes [BR:ath01000] 2. Transferases 2.5 Transferring alkyl or aryl … the dead travel fast by deanna raybourn
KEGG PATHWAY: ath01110 - Genome
Webath01100 : Metabolic pathways: Brite: KEGG Orthology (KO) [BR:ath00001] 09100 Metabolism 09102 Energy metabolism 00195 Photosynthesis AT1G20020 (FNR2) 09180 Brite Hierarchies 09181 Protein families: metabolism 00194 Photosynthesis proteins [BR:ath00194] AT1G20020 (FNR2) Enzymes ... WebBioconductor version: Release (3.16) A package that provides a client interface to the Kyoto Encyclopedia of Genes and Genomes (KEGG) REST server. Based on KEGGSOAP by J. Zhang, R. Gentleman, and Marc Carlson, and KEGG (python package) by Aurelien Mazurie. Author: Dan Tenenbaum [aut], Jeremy Volkening [ctb], Bioconductor Package Maintainer … WebAug 1, 2024 · Heatmap for the 103 Arabidopsis KEGG metabolism pathways. Similar pathways are hierarchically clustered with (1 − cosine similarity) as the distance in the R “hclust” function. The three most similar pathway pairs are ath01110 and ath01100 (0.992), ath00620 and ath01200 (0.990), and ath00290 and ath00660 (0.988). the dead tossed waves series